| Stop ID | Name | Description | # Trips |
|---|
| BNT-0000 | North Station | North Station - Commuter Rail | 174 |
| FR-0034-01 | Porter | Porter - Commuter Rail - Track 1 (Outbound) | 87 |
| FR-0034-02 | Porter | Porter - Commuter Rail - Track 2 (Boston) | 87 |
| FR-0064-01 | Belmont | Belmont - Commuter Rail - Track 1 (Outbound) | 85 |
| FR-0064-02 | Belmont | Belmont - Commuter Rail - Track 2 (Boston) | 85 |
| FR-0074-01 | Waverley | Waverley - Commuter Rail - Track 1 (Outbound) | 85 |
| FR-0074-02 | Waverley | Waverley - Commuter Rail - Track 2 (Boston) | 85 |
| FR-0098-01 | Waltham | Waltham - Commuter Rail - Track 1 (Outbound) | 85 |
| FR-0098-S | Waltham | Waltham - Commuter Rail - Track 2 (Boston) | 85 |
| FR-0115-01 | Brandeis/Roberts | Brandeis/Roberts - Commuter Rail - Track 1 (Outbound) | 85 |
| FR-0115-02 | Brandeis/Roberts | Brandeis/Roberts - Commuter Rail - Track 2 (Boston) | 85 |
| FR-0132-01 | Kendal Green | Kendal Green - Commuter Rail - Track 1 | 85 |
| FR-0132-02 | Kendal Green | Kendal Green - Commuter Rail - Track 2 | 85 |
| FR-0147-01 | Silver Hill | Silver Hill - Commuter Rail - Track 1 | 4 |
| FR-0147-02 | Silver Hill | Silver Hill - Commuter Rail - Track 2 | 3 |
| FR-0167-01 | Lincoln | Lincoln - Commuter Rail - Track 1 (Outbound) | 85 |
| FR-0167-02 | Lincoln | Lincoln - Commuter Rail - Track 2 (Boston) | 85 |
| FR-0201-01 | Concord | Concord - Commuter Rail - Track 1 (Outbound) | 85 |
| FR-0201-02 | Concord | Concord - Commuter Rail - Track 2 (Boston) | 85 |
| FR-0219-01 | West Concord | West Concord - Commuter Rail - Track 1 (Outbound) | 85 |
| FR-0219-02 | West Concord | West Concord - Commuter Rail - Track 2 (Boston) | 85 |
| FR-0253-01 | South Acton | South Acton - Commuter Rail - Track 1 (Outbound) | 87 |
| FR-0253-02 | South Acton | South Acton - Commuter Rail - Track 2 (Boston) | 87 |
| FR-0301-01 | Littleton/Route 495 | Littleton/Route 495 - Commuter Rail - Track 1 (Outbound) | 48 |
| FR-0301-02 | Littleton/Route 495 | Littleton/Route 495 - Commuter Rail - Track 2 (Boston) | 126 |
| FR-0361-01 | Ayer | Ayer - Commuter Rail - Track 1 | 47 |
| FR-0361-02 | Ayer | Ayer - Commuter Rail - Track 2 | 47 |
| FR-0394-01 | Shirley | Shirley - Commuter Rail - Track 1 | 47 |
| FR-0394-02 | Shirley | Shirley - Commuter Rail - Track 2 | 47 |
| FR-0451-01 | North Leominster | North Leominster - Commuter Rail - Track 1 (Outbound) | 47 |
| FR-0451-02 | North Leominster | North Leominster - Commuter Rail - Track 2 (Boston) | 47 |
| FR-0494-CS | Fitchburg | Fitchburg - Commuter Rail - Track 3 (All Trains) | 62 |
| FR-3338-CS | Wachusett | Wachusett - Commuter Rail - Track 3 (All Trains) | 62 |